Representative Publications

REPRESENTATIVE PUBLICATIONS:

SM Carr and HD Marshall. The Codmother: phylogeographic genomics of Atlantic Cod inferred from complete mtDNA genome sequences. In preparation

SMC Flynn and SM Carr. Species-specificity of SNP detection on DNA microarrays: efficiency and accuracy of re-sequencing of chimpanzee and gorilla mtDNA genomes on a human-specific MitoChip. BMC Genomics, submitted.

SM Carr, HD Marshall, AT Duggan, SMC Flynn, KA Johnstone, AM Pope, and CD Wilkerson. 2007. The ArkChip - A multi-species, iterative mtDNA sequencing strategy for biodiversity and phylogeographic genomics. Comparative Biochemistry and Physiology, D: Genomics and Proteomics, in press.

KA Johnstone, HD Marshall, and SM Carr. 2007. Biodiversity genomics for Species At Risk: patterns of DNA sequence variation within and among complete mitochondrial DNA genomes of three species of Wolffish (Anarhichas spp.). Canadian Journal of Zoology, in press.

HD Marshall, KA Johnstone, and SM Carr. 2006. Species-specific oligonucleotides and multiplex PCR for forensic discrimination of two species of scallops, Placopecten magellanicus and Chlamys islandica. Forensic Science International, in press.

MW Coulson, HD Marshall, P Pepin, and SM Carr. 2006. Mitochondrial genomics of gadine fishes: Implications for taxonomy and biogeographic origins. Genome, 49: 1115-1130.

IL Jones, G Fraser, S Rowe, SM Carr, and P Taylor. 2002. Different patterns of parental effort during chick rearing by female and male thick-billed murres (Uria lomvia) at a low-arctic colony. Auk, 119:1064-1074.

SM Carr, HD Marshall, KA Johnstone, LM Pynn, and GB Stenson. 2002. How To Tell a Sea Monster: Molecular Discrimination of Large Marine Animals of the North Atlantic. The Biological Bulletin, 202: 1-5. [Reprinted in Community Voices: Academic, Work, and Public Readings (Marcia C. Muth, ed). Pearson Longman, New York. 2004]

EA Perry, GB Stenson, SE Bartlett, WS Davidson, and SM Carr. 2000. DNA sequence analysis identifies genetically distinguishable populations of harp seals (Pagophilus groenlandicus) in the northwest and northeast Atlantic. Marine Biology, 137: 53-58.

SM Carr, DGS Kivlichan, P Pepin, and DC Crutcher. 1999. Molecular phylogeny of gadid fishes: implications for the biogeographic origins of Pacific species. Canadian Journal of Zoology, 77:19-26.

SM Carr and DC Crutcher. 1998. Population genetic structure in Atlantic Cod (Gadus morhua) from the North Atlantic and Barents Sea: contrasting or concordant patterns in mtDNA sequence and microsatellite data? Pp. 91-103 In The Implications of Localized Fishery Stocks (I. Hunt von Herbing, I. Kornfield, M. Tupper, and J. Wilson. eds.). Northeast Regional Agricultural Engineering Service, Ithaca, New York.

SM Carr and EA Perry. 1997. Intra- and interfamilial systematic relationships of phocid seals as indicated by mitochondrial DNA sequences. Pp. 277-290 in A. E. Dizon, S. J. Chivers, and W. F. Perrin (eds.). Molecular Genetics of Marine Mammal. Special Publication No.3 of the Society for Marine Mammalogy, Lawrence KS.

SM Carr and SA Hicks. 1997. Are there two species of pine marten in North America? Genetic and evolutionary relationships within Martes. Pp. 15-28 in G. Proulx, R. Goddard, and H. Bryant ( eds.). Martes: Taxonomy, Ecology, Techniques, and Management. Provincial Museum of Alberta, Edmonton. 474 pp.

ML Vis, SM Carr, R Bowering, and WS Davidson. 1997. Greenland halibut (Reinhardtius hippoglossoides) in the North Atlantic are a genetically homogeneous stock. Canadian Journal of Fisheries and Aquatic Sciences, 54:1813-1821.

EA Perry, SM Carr, SE Bartlett, and WS Davidson. 1995. A phylogenetic perspective on the evolution of reproductive behavior in pagophilic seals of the northwest Atlantic as indicated by mitochondrial DNA sequences. Journal of Mammalogy, 76:22-31.

SM Carr, JS Wroblewski, AJ Snellen, and KA Howse. 1995. Mitochondrial DNA sequence variation and genetic stock structure of Atlantic cod (Gadus morhua) from bay and offshore locations on the Newfoundland continental shelf. Molecular Ecology, 4:79-88.

P Pepin and SM Carr. 1993. Morphological, meristic, and genetic analysis of stock structure in juvenile Atlantic cod (Gadus morhua) from the Newfoundland Shelf. Canadian Journal of Fisheries and Aquatic Sciences, 50:1924-1933.

GA Hughes and SM Carr. 1993. Reciprocal hybridization between white-tailed deer (Odocoileus virginianus) and mule deer (O. hemionus) in western Canada: evidence from serum albumin and mtDNA sequences. Canadian Journal of Zoology, 71:524-530.

SM Carr and GA Hughes. 1993. The direction of hybridization between species of North American deer (Odocoileus) as inferred from mitochondrial cytochrome b sequences. Journal of Mammalogy, 74:331-342.

SW Ballinger, LH Blankenship, JW Bickham, and SM.Carr. 1992. Allozyme and mitochondrial DNA analysis of a hybrid zone between white-tailed deer and mule deer in west Texas. Biochemical Genetics, 30:1-11.

SM Carr and HD Marshall. 1991b. A direct approach to the measurement of genetic variation in fish populations: Applications of the polymerase chain reaction to studies of Atlantic cod (Gadus morhua). Journal of Fish Biology, 39 (suppl. A):101-107.

SM Carr and HD Marshall. 1991a. Detection of intraspecific DNA sequence variation in the mitochondrial cytochrome b gene of Atlantic cod (Gadus morhua) by the polymerase chain reaction. Canadian Journal of Fisheries and Aquatic Sciences, 48:48-52.

SM Carr, AJ Brothers, and AC Wilson. 1987. Evolutionary inferences from restriction maps of mitochondrial DNA from nine taxa of Xenopus frogs. Evolution, 41:176-188.

SM Carr, SW Ballinger, JN Derr, LH Blankenship, and JW Bickham. 1986. Mitochondrial DNA analysis of hybridization between sympatric white-tailed deer and mule deer in west Texas. Proceedings of the National Academy of Sciences (USA), 83:9576-9580.

AC Wilson, RL Cann, SM Carr, M George Jr., UB Gyllensten, K Helm- Bychowski, RG Higuchi, SR Palumbi, EM Prager, RD Sage, and M. Stoneking. 1985. Mitochondrial DNA and two perspectives on evolutionary genetics. Biological Journal of the Linnaean Society, 26:375-400.